Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNNSK |
2RAG Chain:A ((330-350)) | ---------------------------------------------------------------------------------------PAARGDFDLYMKSMLHVLKVA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 972 for 76 contacts (12.8/contact) +
2D Compatibility (PS) -2237 + (NN) -2980 + (LL) 6952
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -293.0 ( -3.86 by residue)
QMean score : 0.454
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