Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKPNVVQLNNQYINDENLKKRYEAEELRRKNRLMGWVLIFVMLLFILPTYNLVKS-YRTLQERRQEVVKLT-----KDYQTLTNRTENQKLLAKQLKNPDYVQKYARAKYYFSKTGEMIYPLPDLLPK
4I1S Chain:A ((36-128))
-----LIQMEKKAARDGNRKDRVCAEHLKKYNE----ALQINDTIRRIDAYNHLKTFYNDEKEKKFE-----GSLDESDIFLMTLFLRNKKILKKLAENPEYENEKLTKLRNTIMEHFTRTEESARGII
General information:
TITO was launched using:
RESULT:
Template:
4I1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10229 for 488 contacts (21.0/contact) +
2D Compatibility (PS) -8971 + (NN) -6581 + (LL) 1068
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -7105.0 ( -14.56 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_4I1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I1S-query.scw
PDB file :
Tito_Scwrl_4I1S.pdb
: