Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIETIEHFLAYSDDKLEELADKNYQLRQTIVEKEKIESREK
2YO0 Chain:A ((290-309))
---------------EDKIEEILSKIYHIENEIAR---------
General information:
TITO was launched using:
RESULT:
Template:
2YO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2809 for 71 contacts (39.6/contact) +
2D Compatibility (PS) -2221 + (NN) -1400 + (LL) 2232
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -530.0 ( -7.46 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_2YO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YO0-query.scw
PDB file :
Tito_Scwrl_2YO0.pdb
: