Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNQLIYTGKAKDIYSTKDENVIRTVYKDQATMLNGARKETIDGKGALNNQISSLIFEKLNMAGVVTHYIEQISKNEQLNKKVDIIPLEVVLRNVTAGSFSKRFGVEEGRVLETPIVEFYYKNDDLNDPFINDEHMKFLGIVNDEEIAYLKGETRRINELLKDWFAQIGLNLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGNH-MDKDVFRRDLGSLTDVYQVVLEKLIAL
4O7S Chain:A ((15-231))
-------------MIPIDDDKLIME-FKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLGISLD-EIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGKDKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERITGE
General information:
TITO was launched using:
RESULT:
Template:
4O7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78266 for 1631 contacts (-48.0/contact) +
2D Compatibility (PS) -23171 + (NN) -3853 + (LL) 1012
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -131478.0 ( -80.61 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_4O7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7S-query.scw
PDB file :
Tito_Scwrl_4O7S.pdb
: