Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ |
| 3TX3 Chain:A ((191-225)) | -----------------------------------------------------------------LSFPRMRSELHQQRSKTLGFGFGVTVLTMIPLINLIIMPLAVCGATSLWVDHYRRSALS------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6166 for 146 contacts (-42.2/contact) +
2D Compatibility (PS) -3644 + (NN) -2418 + (LL) 17248
1D Compatibility (HY) -400 + (ID) 150
Total energy: 4470.0 ( 30.62 by residue)
QMean score : -0.022
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