Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAAFNKLLPEVQL--DAAVSRNFSKSFDIFENRIQNKALSKIVVLAVGVNSLDNYK----------TDLSQFIKSLP-KGHRLIIVTPYNAKN---------MSQVTTVRDYELSLMKKYNYITVADWYKVATEH----PEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
| 3P94 Chain:A ((20-203)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVPSNVVFMGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEMLVRFRQDVIN-LKPKAVVILAGINDIAH-NNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADK-NGLTYVDYHSAMKDERNGLPAN-LSKDGVHPTL-E--GYKIMEKIVLEAIHKTVK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79502 for 1261 contacts (-63.0/contact) +
2D Compatibility (PS) -16748 + (NN) -3903 + (LL) 36188
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -70715.0 ( -56.08 by residue)
QMean score : 0.588
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