Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPP-----VDYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
3DL0 Chain:A ((1-216))
MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDD-CERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGLK
General information:
TITO was launched using:
RESULT:
Template:
3DL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66692 for 1637 contacts (-40.7/contact) +
2D Compatibility (PS) -23056 + (NN) -12099 + (LL) 204
1D Compatibility (HY) -22800 + (ID) 6200
Total energy: -130643.0 ( -79.81 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3DL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL0-query.scw
PDB file :
Tito_Scwrl_3DL0.pdb
: