Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKYVKWLIPISIIGMLLAGCQMNSESKSQSNEVKNSKHSAVKKDKKMTKKEQLVYLNEHEQ
2K4F Chain:A ((1-57))
CSKNRKAKAKPVTRGTG-AGSRPRGQNKERPPPVPNPDYEPIRKGQR----DLYSGLNQRAV
General information:
TITO was launched using:
RESULT:
Template:
2K4F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13058 for 262 contacts (49.8/contact) +
2D Compatibility (PS) -5493 + (NN) 2374 + (LL) 564
1D Compatibility (HY) 3600 + (ID) 550
Total energy: 13553.0 ( 51.73 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_2K4F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K4F-query.scw
PDB file :
Tito_Scwrl_2K4F.pdb
: