Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKF-EKLISGERFAGKKQFIRDIQPFFNAFKAD |
2C5J Chain:A ((9-88)) | --------------------------------------------------------------------------------QQVVKDTKEQLNRINNYITRHNTA---EEEIQDILKDVEETIVDLDRSIIVMKRDENEDVSGREAQVKNIKQQLDALKLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6822 for 306 contacts (22.3/contact) +
2D Compatibility (PS) -7519 + (NN) 1046 + (LL) 6940
1D Compatibility (HY) -2400 + (ID) 900
Total energy: 3989.0 ( 13.04 by residue)
QMean score : 0.350
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