Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITIVSNKSRSNMRAQIDIPLFVHTNLDQISDIVTKINEEYVSKHPAIV-GEPTVFGPTTNANGQFVYRINIFTQN---GAQF-DIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
1OPL Chain:A ((129-283)) | ------------------------------------------------------------------------------------WVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS----DGKLY---------VSSESRFNTLAEL-----VHHHSTVADGLITTLH------YPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58145 for 901 contacts (-64.5/contact) +
2D Compatibility (PS) -15910 + (NN) -3264 + (LL) 11200
1D Compatibility (HY) -3200 + (ID) 2200
Total energy: -71519.0 ( -79.38 by residue)
QMean score : 0.245
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