Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFGKKLGFLALLMSIVLILGACGKTGLGNSTGNSTKNVTKKSAKNLKLGVSISTTNNPYFVAMKDGIDKYASNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRG-SEGGKVLTTVASDNVAAGKMAADYAVKKLGKK---AKAF---ELSGVPGASATVDRGKGFHSVA--KSKLDILSSQSANFDRAKALNTTQNMIQGHKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKG-DISATIAQQPAKMGEIAIQAAIDHYKGKKVEKETIS-PIYLVTKDNVEKYNW
2FN8 Chain:A ((4-288))-----------------------------------------------KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINARGLAVAQIYSDNYYGGVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRTDIYIFGFDGAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLRGERSFPEIVPVTVELVTRENIDKYTA


General information:
TITO was launched using:
RESULT:

Template: 2FN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71170 for 2444 contacts (-29.1/contact) +
2D Compatibility (PS) -29719 + (NN) -12364 + (LL) 2452
1D Compatibility (HY) -22400 + (ID) 5050
Total energy: -138251.0 ( -56.57 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_2FN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FN8-query.scw
PDB file : Tito_Scwrl_2FN8.pdb: