Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLDMLSYDFMQRALLAVVAISIFAPILGIFLILRRQSLMSDTLSHVSLAGVALGVVLGISPTWSTIFVVTLAAVVLEYLRTVYKHYMEISTAILMSMGLAISLIVMSKAHNVGNVSLEQYLFGSIITIGKEQVIALFVIALITFILTILFIRPMYILTFDEDTAFVDGLPVRTMSILFNVVTGIAIALTIPAAGALLVSTIMVLPASIAMRLGRNFKTVIFLGMLIGFVGMVAGIFLSYYWETPASATITMIFIGIFLLVSLVGLLRKR |
2JY0 Chain:A ((1-12)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------MDREMAASAGGAVFVGLVLLTLSPHYK------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -582 for 34 contacts (-17.1/contact) +
2D Compatibility (PS) -1282 + (NN) -1120 + (LL) 25452
1D Compatibility (HY) 800 + (ID) 150
Total energy: 23118.0 ( 679.94 by residue)
QMean score : 0.092
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