Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIKLTPEELRISAKKYTTGSQSITDVLTVLTQEQAVIDENWDGTAFDSFEAQFNELSPKITQFAQLLEDINQQLLKVADVVEQTDSDIASQINK
4J41 Chain:A ((4-89))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIAILEGISTDLKRIADKFRNT----------
General information:
TITO was launched using:
RESULT:
Template:
4J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14631 for 482 contacts (-30.4/contact) +
2D Compatibility (PS) -8953 + (NN) -153 + (LL) 448
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -28389.0 ( -58.90 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J41-query.scw
PDB file :
Tito_Scwrl_4J41.pdb
: