Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETEEGL--NTVGDLVAYVEEKVK
3GZM Chain:A ((5-79))
-STFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNN-
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31611 for 467 contacts (-67.7/contact) +
2D Compatibility (PS) -7536 + (NN) -2323 + (LL) 272
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -49998.0 ( -107.06 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: