Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELIDGKALSQKMQAELGRKVERLKEQ-HGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQH--INDKKIILAIDPKKDVDGFHPMNTGHLWSG--RPMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMN-RDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRSVSL |
| 1DIA Chain:A ((5-293)) | --EILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY-----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188840 for 2380 contacts (-79.3/contact) +
2D Compatibility (PS) -29898 + (NN) -10439 + (LL) 108
1D Compatibility (HY) -28400 + (ID) 6300
Total energy: -263769.0 ( -110.83 by residue)
QMean score : 0.597
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