Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDD-LLLFLKGLKAID-----DIKVGSPIFKYFWTSLSLQAPLKALEFVLEQAKMPTELSGELSETQYLVAQFSDELAPHDDFWIALSQVIYDSFPGNSLAEDTVLNRKLHQFRYLISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGEIFAFPDDEPVINSKLLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDPKFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYFNKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN |
| 3D1B Chain:A ((463-522)) | -------IPHYHNKLIDFSQVLQLVFSASEKFPIQENQPLPEQLMFLSNLEKQTPFAKAVGSSIYKL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5266 for 244 contacts (-21.6/contact) +
2D Compatibility (PS) -5566 + (NN) -726 + (LL) 19044
1D Compatibility (HY) -3600 + (ID) 700
Total energy: 3186.0 ( 13.06 by residue)
QMean score : 0.127
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