Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINI-DEKPEKIEYVKNLGFSAAPVIEAGNVVFSGFQPSKLKELV
3ZIJ Chain:A ((1-75))
MKKIEVYTQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEVVAGFQIEKLQQLL
General information:
TITO was launched using:
RESULT:
Template:
3ZIJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33994 for 524 contacts (-64.9/contact) +
2D Compatibility (PS) -7838 + (NN) -2424 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 900
Total energy: -51956.0 ( -99.15 by residue)
QMean score : 0.839
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIJ-query.scw
PDB file :
Tito_Scwrl_3ZIJ.pdb
: