Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIILQGNKIERSFSGDVLFDNINIQVDQRDRIALVGRNGAGKSTLLKILVGEETPTKGEINKKRDLSLSYLAQDSRFQSENTIFQEMLQVFDSLREVEKRL----RELELQMGQVSGSDLEQLMKTYDILSEEFREKGGFTYESDIKAILNGFKFNSDMWEMPISELSGGQNTRLALAKMLLEKPELLVLDEPTNHLDID---TIAWLENYLVNYQGALIIVSHDRYFLDKVATVTYDLTTHSLDRYVGNYSKFMDLKAEKIATEE--KNFEKQQKEIAKLEDFVQRNIVRASTTKRAQARRKQLEKMERLDKPNVEQKSANMTFHAGKVSGNVVLTLENAAIGYEGVSLSELIDLDVKKFDAIAIVGPNGIGKSTLIKSLVG-QIPFIKGEAKLGANVETGYYDQ--------------SQSNLTKTNTVLDELWNAFSTTPEVEIRNRLGAFLFSGDDVKKLVSMLSGGERARLLLAKLSMENNNFLILDEPTNHLDIDSKEVLENALIEF----DGTLLFVSHDRYFINRVATKVLEISDKGSTLYLGDYDYYLTKKAELEELARLNEEEVSASKTEIDVTSDYETQKANQKEFRKITRRIAEIEVRLEVLENNENNINGLMLETNDIGKLSDLQKELESIQEEQLLLMEEWENLNMRLDL |
| 1YQT Chain:A ((50-472)) | -------------------------------VGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGN-----------ELQNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIE-LLKKAD-------ETGKL--EEVVKALEL-----ENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDII-----HVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENV-----RFRPYEIKFTKTGERVEIERETLVTYPRLVKD----------------YGSFRLEVEPG---------------EIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPT---EGKIEWDLTVAYKPQYIKADYEGTVYELLSKIDASKLNS------NFYKT----ELLKPLGII----DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVFEGEPGKYGRALPPMGMREGMNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72904 for 3042 contacts (-24.0/contact) +
2D Compatibility (PS) -41465 + (NN) -7865 + (LL) 12688
1D Compatibility (HY) -21200 + (ID) 6350
Total energy: -137096.0 ( -45.07 by residue)
QMean score : 0.378
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