Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRESIFEETAKGKVSRHVLLTILLALILLFTADFLTYIIIELIISLDFWKLEWDSDIVQLIILLATSISTVMLFMWVKFKEKRPISSLGLFKEGALTELSRGWLVESVLFGACLILTIISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVEILCRGWLLPVSATKYSKIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD |
4TNJ Chain:T ((1-32)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRITKK-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3208 for 112 contacts (-28.6/contact) +
2D Compatibility (PS) -2935 + (NN) 2534 + (LL) 22628
1D Compatibility (HY) -4000 + (ID) 250
Total energy: 14769.0 ( 131.87 by residue)
QMean score : -0.284
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