Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG
4J41 Chain:A ((4-89))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIAILEGISTDLKRIADKFRNT----------
General information:
TITO was launched using:
RESULT:
Template:
4J41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13559 for 482 contacts (-28.1/contact) +
2D Compatibility (PS) -9076 + (NN) -886 + (LL) 436
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -28685.0 ( -59.51 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_4J41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J41-query.scw
PDB file :
Tito_Scwrl_4J41.pdb
: