Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCP--GKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQ-VGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
2C8M Chain:A ((1-251)) | -------MEGRLLLLET---PGNTRMSLAYDEAIYRSFQYG-DKPILRFYRHDRSVIIGYFQ--VAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDD---MDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------------ERVANVTDFV--DVSIDEVRNALIRGFSETLHIDFREDTITEKEESLARELFDKKYSTEEWNMGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175165 for 1921 contacts (-91.2/contact) +
2D Compatibility (PS) -24739 + (NN) -1627 + (LL) 1504
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -207727.0 ( -108.13 by residue)
QMean score : 0.394
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