Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDY-LLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
4QAM Chain:B ((43-102)) | -----------------------------------------------------------------------------------------------YPEAEVMSDENIKQVYVEYKFYDLPLSETETPVSLRKPRAGEEIHFHFSKVIDLDPQEQQGRRRFLFDMLNGQDPDQGHLKFTVVSDPLDEEKKECEEVGYAYLQLWQILESGRDILE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1149 for 254 contacts (4.5/contact) +
2D Compatibility (PS) -5934 + (NN) 294 + (LL) 7788
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -1553.0 ( -6.11 by residue)
QMean score : 0.157
|
|
|