Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKSISVKSYANIAIIKYWGKADAEKMIPATSSISLTLENMYTETRLTTLGKDAKKDEFYISGVLQNDHEHDKMSAILDRFRQ--NKSGFVKIETTNNMPTAAGLSSSSSGLSALVKACNDFFGTNLSQSQLAQEAKFASGSSSRSFFGPVAAWDKDSGDI----YKVHT---DLDLAMIMLVLNDKRKPISSREGMKICTETSTTFNEWVRQSEQDYQDMLVYLKNNDFQKVGQLTERNALAMHSTTKTATPAFSYLTEETYKAMDVVKKLREKGHECYYTMDAGPNVKVLCLRQDLEALAAILEKDYRIIVSTTKELADG |
| 4DPU Chain:A ((8-305)) | ---KSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVT-FDPDFTEDCLILNGNEVNAKEKEKIQNYMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGHDDLTSYAHGINSNGWEKDLSMIFVVINNQSKKVSARSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMDAGPNVKVLVEKKNKQAVMEQFLKVFDESKIIASDIISS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70629 for 2405 contacts (-29.4/contact) +
2D Compatibility (PS) -31214 + (NN) -9452 + (LL) 12
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -138733.0 ( -57.69 by residue)
QMean score : 0.467
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