Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYP-VITGRELIDKHIEQLERFKDSIEICLKEEVLSFEKV----DDVFTIQTDKDQ-HLSRAIVFACGNGAFAPRLLGLENEENYADNNLFYNVTKLEQF-AGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVD-ILKASGVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRYWNLDY-----KRSSINVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3R9U Chain:A ((6-311)) | ------DVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQ---ITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFG------LKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGS---APKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKV-KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAPKQVICAAGDG--AVAALSAMAYIESL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207072 for 2479 contacts (-83.5/contact) +
2D Compatibility (PS) -31671 + (NN) -9716 + (LL) 2028
1D Compatibility (HY) -15600 + (ID) 4300
Total energy: -266331.0 ( -107.43 by residue)
QMean score : 0.420
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