Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVH------VFSFAAGEASKTLEVANRIYGFLAKHHMT--RSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTIDSILDSAL---------------AIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCL-KFGLPVHYAE-----------WDKDVLFDILSHDKKASGQFIKIVILPQLGSATVHQIPLEEMRDYLEK
1NUA Chain:A ((41-373))--------------------------------------LVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA----GGLRNLLNWGHSIGHAIEAIL-TPQILHGECVAIGMVKEAELARHLGIL-KGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALD----GPKKKIVLLSAIGTPYETRASVVANEDIRVV


General information:
TITO was launched using:
RESULT:

Template: 1NUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189715 for 2325 contacts (-81.6/contact) +
2D Compatibility (PS) -30573 + (NN) -8345 + (LL) 2972
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -252561.0 ( -108.63 by residue)
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_1NUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NUA-query.scw
PDB file : Tito_Scwrl_1NUA.pdb: