Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEDIKKQVRRAFDFRMAIRVYNNNDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVAWGAQYQLDTASHFVLLLAEKGAYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDKKEAISCMVSFGY---------RLREPKHS-RARKERQEVITWVE
4EO3 Chain:A ((137-320))
LIEEDL--SLNKHIEWRRARRALKKDRVPREELELLIKAAHLAPSCMNNQPWRFVVVDEEELLK---KIHEALPGGNYWMK----------------NAPALI------------AVHSK----KDF---DCALPDNR---DYFLFDTGLAVGNLLVQATQMGLVAHPVAGYDPVKVKEILK---IPED--HVLITLIAVGYLGDESELSEKHRELERSERVRKELSEIVRWNL
General information:
TITO was launched using:
RESULT:
Template:
4EO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79815 for 1218 contacts (-65.5/contact) +
2D Compatibility (PS) -18361 + (NN) -3952 + (LL) 2940
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -116038.0 ( -95.27 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_4EO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EO3-query.scw
PDB file :
Tito_Scwrl_4EO3.pdb
: