Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLDLNSVVVHIFS-EDERQHY--NLEKLWHEAPLLDAEDFMTE
3IHP Chain:A ((356-395))
---------------------------------------------------------------------------------LNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQ
General information:
TITO was launched using:
RESULT:
Template:
3IHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -278 for 158 contacts (-1.8/contact) +
2D Compatibility (PS) -3806 + (NN) -2263 + (LL) 6012
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -3585.0 ( -22.69 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_3IHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHP-query.scw
PDB file :
Tito_Scwrl_3IHP.pdb
: