Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDRYILAVESSCDETSVAILKNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAARDVKELQYPLLALLVSGGHTELV-YVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPAGREIDQLAHKGQDTYHFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLEDLCASFQAAVLDILLAKTQKALLKYPVKTLVVAGGVAANQGLRERL-ATDISPDIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAKPSLAFEGL |
| 2VWB Chain:A ((4-305)) | ------LGLEGTAEKTGVGIVTSDGEVLFN---KTIM-----------EAADHHAETFPKLIKEAFEV--VDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVIAYVSKK--YRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTV---KGMDIAFSGLLTAAMRAYDAGER------LEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLDETKIIPNYRTDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -199838 for 2539 contacts (-78.7/contact) +
2D Compatibility (PS) -31591 + (NN) -16272 + (LL) 2240
1D Compatibility (HY) -21600 + (ID) 5000
Total energy: -272061.0 ( -107.15 by residue)
QMean score : 0.519
|
|
|