Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKIFDTHTHLNVENFEGKIDEEINLASELGVTKMNVVGFDQDTISKSLELSSQY-AQVYSTIGWHPTEAGSYDD--------NIESMIISHLENPKVIALGEIGLDY----YWMEDPKDIQIEVFKRQIELSKEYNLPFVVHTRDALEDTYEVIKESGVGPFGGIMHSFSGSLEMAQKFIDLGMMISFSGVVTFKKALDVQEAARELPLDKILVETDAPYLAPVPKRGRENKTAYTRYVVEKIAELRGITVEEVAEATYQNAVRIFRLDEKN |
2Y1H Chain:A ((4-263)) | -VGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ------RSVTLKDLDVALPIIENYKD-RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSII--RSGQKQKLVKQLPLTSICLETDSPALG--PEKQVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147689 for 2130 contacts (-69.3/contact) +
2D Compatibility (PS) -25583 + (NN) -8091 + (LL) -144
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -201307.0 ( -94.51 by residue)
QMean score : 0.685
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