Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLTLVYISLSGNTQSFVKRLSEQLSTWHNCQVSTINIKEQNHQTFPVDQPFVALLPTYLEGGNGIDNGDQEILTIPLGDFIAAHNNVKNCIGIVGSGNRNFNNQYCLTAKQYSERFGFPMLGDFELRGTSSDVERIANIIVETLSNFKA
2XOE Chain:A ((1-107))
---MLVAYDSMTGNVKRFI----------HKLNMPAVQIGED----LVIDEDFI--LITYT---TGFGNVPERVL-----EFLERNN--EKLKGVSASGNRNWGDMFGASADKISAKYEVPIVSKFELSGTNNDVEYFKERVREIATH---
General information:
TITO was launched using:
RESULT:
Template:
2XOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69170 for 834 contacts (-82.9/contact) +
2D Compatibility (PS) -11586 + (NN) -4254 + (LL) 1920
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -95240.0 ( -114.20 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2XOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOE-query.scw
PDB file :
Tito_Scwrl_2XOE.pdb
: