Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQE---GQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
2JNZ Chain:A ((16-82))
-TFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-----GNVWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPEE----------
General information:
TITO was launched using:
RESULT:
Template:
2JNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8381 for 365 contacts (23.0/contact) +
2D Compatibility (PS) -6685 + (NN) -604 + (LL) 1652
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -106.0 ( -0.29 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_2JNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNZ-query.scw
PDB file :
Tito_Scwrl_2JNZ.pdb
: