Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIGVLGLQGAVREHIH---AIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLI--DTYQFMEPLREFA-AQGKPMFGTCAGLIILAKEIAG-------SDNPHLGLLNVVVERNSFGRQVDSFEADLTI----KGLDEPFTGVFIRAPHILEA-GENVEVLSEHNGR------IVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV
4ADS Chain:G ((2-215))
-ITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHESYGPNIIAAVEQNNCLGTVFNPELLPHTAFQQYFYEKVKNYK-----
General information:
TITO was launched using:
RESULT:
Template:
4ADS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149472 for 1573 contacts (-95.0/contact) +
2D Compatibility (PS) -19955 + (NN) -1173 + (LL) 904
1D Compatibility (HY) -18400 + (ID) 3600
Total energy: -191696.0 ( -121.87 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4ADS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADS-query.scw
PDB file :
Tito_Scwrl_4ADS.pdb
: