Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
M-----EPIFIIGIIL------GLVILLFLSGSAAKP--LKWIGITAVKFVAGALLLVCVNMFGGSLGIHVP---INLVTTAISGILGIPG--IAALVVIKQFII-------
2KCK Chain:A ((1-112))
MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84301 for 558 contacts (-151.1/contact) +
2D Compatibility (PS) -8701 + (NN) -4363 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -100365.0 ( -179.87 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2KCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KCK-query.scw
PDB file :
Tito_Scwrl_2KCK.pdb
: