Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDETVKLNHTCVICDQEKNRG-I-HLY----TKFICLDCERKVISTSTSDPDYAFYVKKLKSIHTPPLYS
5FMF Chain:R ((119-159))
-----PNGYMCPICLTKYTQLEAVQLLNFDRTEFLCSLCDEPLVED------------------------
General information:
TITO was launched using:
RESULT:
Template:
5FMF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9278 for 196 contacts (-47.3/contact) +
2D Compatibility (PS) -3363 + (NN) 3360 + (LL) 1436
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -11045.0 ( -56.35 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_5FMF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FMF-query.scw
PDB file :
Tito_Scwrl_5FMF.pdb
: