Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSAESFFLVNGTTVGNLAMILSVCEPGDTILVQRNCHKSVFHAVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYP-DAKGLVLTNPTY--YGHSADLTEIITEAHHYGIPVLVDEAHGAHFILGE----PFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEYLNRLQSSSPSYPIMASLDIARAYVQHIIEEQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILERANIFTELADENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
| 2X8U Chain:A ((93-257)) | ---------------------------------------------------------------KACEDALKEFYGTEHAIVFSTGYQA-NLGMISTLAGKGDYIILDADSHASIYDGCWLGDAEIVRF-----------RHNSVEDLDKRLGRLPAEAGKLVVLEGVYSMMGDIAPLQEMVAVSKKHGAMILVDEAHGMGF-FGEHGRGVFEEAGVEADVDFVVGTFSKSVG--TVGGFCVSN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117184 for 1313 contacts (-89.2/contact) +
2D Compatibility (PS) -17487 + (NN) -6229 + (LL) 22300
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -133350.0 ( -101.56 by residue)
QMean score : 0.578
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