Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGL-DMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
3AF5 Chain:A ((19-74)) | -----------------------------------------------------------------------------------------RAVVNQMVPKEAKITEIEF--EGPELVIYVKNPE----GELIKDLAKVLKKRISVRP---------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31020 for 281 contacts (-110.4/contact) +
2D Compatibility (PS) -5131 + (NN) 921 + (LL) 16468
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -24312.0 ( -86.52 by residue)
QMean score : 0.526
|
|
|