Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK
3BXG Chain:A ((158-200))
---------------------------------------------------------------------------EAKTMAQRRNTPLEDLKKIDDNDAVTEAF--GYYFNADGEVVHKV-----
General information:
TITO was launched using:
RESULT:
Template:
3BXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2721 for 258 contacts (-10.5/contact) +
2D Compatibility (PS) -4522 + (NN) -1822 + (LL) 7236
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -4479.0 ( -17.36 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_3BXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BXG-query.scw
PDB file :
Tito_Scwrl_3BXG.pdb
: