Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNDALTSLACSLKPGTTIKGKWNGNTYTLRKQLGKGANGIVYLA--ETSDGHVALKVSD-----DSLSITSEVNVLKSFSKAQSVTMGPSFFDTDDAYIPSANTKVSFYAMEYIKGPLLLKYVSDK--GAEWIPVLMIQLLSSLSVLHQQGWIFGDLKPDNLIVTGPPARIRCIDVGGTTKEGRAIKEYTEFYDRGYW---------GYGTRKAEPSYDLFAVAMIMINSVHKKEFKKTNQPKEQLRSLIEGN--PLLQKYKKALFSALNGDYQSADEMKKDMLDAGQKAAQRKQPIKASPQPATRQRQQKPRQGKITKTRYTPKQKPAKSGGLFETTLIVISVLALYFAYIIFFLI |
4JDK Chain:A ((81-296)) | --------------------------------KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV----------VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-DGRVKLSDFGVCAQVSKEVPRRKSLVGTPYWMAPELISRLPYG-----PEVDIWSLGIMVIEMV-DGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -62206 for 1411 contacts (-44.1/contact) +
2D Compatibility (PS) -21554 + (NN) -13056 + (LL) 9076
1D Compatibility (HY) -19600 + (ID) 2800
Total energy: -110140.0 ( -78.06 by residue)
QMean score : 0.344
|
|
|