Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFPLAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
3O7M Chain:A ((5-173))
--NIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYG-------KVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIA---------
General information:
TITO was launched using:
RESULT:
Template:
3O7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135741 for 1242 contacts (-109.3/contact) +
2D Compatibility (PS) -17272 + (NN) -5807 + (LL) 1120
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -182500.0 ( -146.94 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3O7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O7M-query.scw
PDB file :
Tito_Scwrl_3O7M.pdb
: