Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREV-RWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
4M5J Chain:A ((6-139))
---VAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVR--ERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPEL-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102721 for 996 contacts (-103.1/contact) +
2D Compatibility (PS) -13554 + (NN) -3425 + (LL) 2384
1D Compatibility (HY) -10000 + (ID) 3200
Total energy: -130516.0 ( -131.04 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_4M5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M5J-query.scw
PDB file :
Tito_Scwrl_4M5J.pdb
: