Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MICQECHERPATFHFTKVVNGEKIEVHICEQCAKEN--SDSYGISANQGFSIHNLLSGLLNMDSSFQNAGTQMFSHSEQISACPKCGMTFQQFRKIGRFGCSECYK----TFHSNITPILRKVHSGNTVHAGKIPKRIGGNLHVRRQIDMLKKELESLIHQEEFENAAHVRDQIRLLEQSLKSTDSEEEQE |
| 3OGG Chain:A ((1146-1249)) | --------------YSRILNGDNIILHMLYNSRKYMIIRDTDTI----------NCVYALKLQSNLGNYGIGIFSIKNIVSKNKYCSQIFSSFRE-NTMLLADIYKPWRFSFKNAYTPV------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9626 for 453 contacts (21.2/contact) +
2D Compatibility (PS) -8829 + (NN) 1188 + (LL) 7168
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: 403.0 ( 0.89 by residue)
QMean score : 0.045
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