Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFL--EGVIVIPQFVLEELQHIADSSDVLK------RNRGRRGLDILNRIQKEL--DIEVEI--------Y---EGDFEDIQEVDSKLVKLAKLT------------------SGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
| 2DOK Chain:A ((7-184)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------ELEIRPLFLVPDTNGFIDHL--ASLARLLESRKYILVVPLIVINELDGLAK----AGGYARVVQEKARKSIEFLEQRFESRDSCLRALTSRGNELESIAFRSEDI---GNNDDLILSCCLHYCKDKAKDFMPAEPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQ------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71755 for 932 contacts (-77.0/contact) +
2D Compatibility (PS) -13696 + (NN) -5142 + (LL) 20188
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -77105.0 ( -82.73 by residue)
QMean score : 0.554
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