Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
2CON Chain:A ((14-42))
----YILRCHGCF-KTTSDM-----------NRVFCGHCGNKTLK----
General information:
TITO was launched using:
RESULT:
Template:
2CON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5507 for 152 contacts (-36.2/contact) +
2D Compatibility (PS) -2989 + (NN) 117 + (LL) 1648
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -9481.0 ( -62.38 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2CON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CON-query.scw
PDB file :
Tito_Scwrl_2CON.pdb
: