Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG
1CZ6 Chain:A ((3-22))
---------VCRQIKICRRRGGCYYKCTN--------
General information:
TITO was launched using:
RESULT:
Template:
1CZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3170 for 80 contacts (-39.6/contact) +
2D Compatibility (PS) -1841 + (NN) 1924 + (LL) 676
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -5961.0 ( -74.51 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1CZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CZ6-query.scw
PDB file :
Tito_Scwrl_1CZ6.pdb
: