Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNALVAHNSKAWDKKVETGNEWTVAVEQQVIEQAKKGNWDIRVTPMKDVPKDWFPPIKGLKVLCLASGGGQQGPVLAAAGADVTVLDNSEKQLNQDRMIAERDGLTIHTVKGSMDDLSVFNDESFDVIVHPVANV--FVENVLPVWKEAYRVLKRNGILISGFVNPVVFLFDTELEQQGVLKVKHSIPYADPEDLPKHKVKKLIENNEALEFGHSLEDQIKGQIDAGFIVTGFYEDKGGFVLDQYIHTYSATRSVKV |
2AVN Chain:A ((57-159)) | ------------------------------------------------------------RVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLE----VAREKGVK-NVVEAKAEDLP-FPSGAFEAVL-ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFL--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60853 for 758 contacts (-80.3/contact) +
2D Compatibility (PS) -10876 + (NN) -1208 + (LL) 10320
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -73017.0 ( -96.33 by residue)
QMean score : 0.433
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