Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSFTLKQQWFGNIRKDILAGILVALAL---------IPEAIGFSIIAGV------DPMVGLYASFCIAIIISIFGGRPGMISAATGSMAVVMV---SLVADHG---LQYLFAATILTGIIQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGAS--------------WSMYAMLAGSLVIIYVLPRFTT---------AVP---SPLVAIIVMTIIAVTFHV-DVRTVGDMGNISSSLPHFLIPDVP----FTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMT---DTDSDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKA----GG-----RGRLSAFVAGAFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWS-SLK---------------------GLKKAPLTDSIVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLRTYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKIVAKFKEQGIEAELKGLNKASKSLMKQMA |
| 4YZF Chain:A ((389-877)) | ----------RYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKV-----VIHPLGLRSEFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTVM--IQEVKEQRISGLLVAVLVGLSIL-MEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTP-ASLALPFVLILTVPLRRVLLPLI---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320306 for 2962 contacts (-108.1/contact) +
2D Compatibility (PS) -37961 + (NN) -10291 + (LL) 8356
1D Compatibility (HY) -30000 + (ID) 2850
Total energy: -393052.0 ( -132.70 by residue)
QMean score : 0.298
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