Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLITVPLAGELKFYPLNEEFRVSFGAPVFFFFLSLLRHVPAVLPGFLTGAAVFIFRVFLELWGGGHNGLTPILYDQASGFFFYMTYACLFSILKANRFRERPIMLGFIGFMIEVVSDCVELTVQFLIFHTVVTPEKITDIAVIAISHTFIVMSFYSVLKLYETQSREKQTRQQHEHMLMIVSNLYEETVHLKKTLKTTEKVTNDSYQLYREMKGKDVQLSGRILRLAGEIHEVKKDNQRIFAGLSKLISNESLRDYMRASDLLQLVIRMNEKYAEALGKQIDFYCSIEGEHDEYHVFIVLSIINNLTANAVEAMDEEGMVSLRLRKPNESMVEFQVEDNGPGISEKIGDIVFDPGF-TSKYDEFGTPSTGIGLSYVKEIVTELEGDITFDN-QQRGVVFAIRLPVRHLIQKG
4U7N Chain:A ((507-608))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLDNIMNNAIKYSPDGGVVTCRLLETHNQVI-ISISDQGLGIPRADLGHVFDRFFR-----------TGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLP--------


General information:
TITO was launched using:
RESULT:

Template: 4U7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 360 -44870 -124.64 -504.16
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -124.64
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.604

(partial model without unconserved sides chains):
PDB file : Tito_4U7N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U7N-query.scw
PDB file : Tito_Scwrl_4U7N.pdb: