Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRRKTALMMLSVLMVLAIFLSACSGSKSSNSSAKKSAGKPQQGGDLVVGSIGEPTLFNSLYSTDDASTDI-ENMLYSFLTKTDE-KLNVKLSLAESIKELDGGLAYDVKIKKGVKFHDG------KELTADDVVFTYS----VPLSKDYKGERGSTY-------EMLKSVEKKGDYEVLFKLKYKDGNFYNN-ALDSTAILPKHILGNVPIADLEENEFNRKKPIGSGPFKFKEWKQGQYIKLEANDDYFEGRPYLDTVTYKVIPDANAAVAQLQAGDINFFNVPAT-DYKTAEKFNNLKIVTDLALSYVYIGWNEKNELFKDKKVRQALTTALDRESIVSQVLDGDGEVAYIPESPLSWNYPKDIDVPKFEYNEKKAKQMLAEAGWKDTNGDGILDKDGKKFSFTLKTNQGNKV----REDIAVVVQEQLKKIGIEVKTQIVEWSALVEQMNPPNWDFDAMVMGWSLSTFPDQYDIF----HSSQIKKGLNYVWYKNAEADKLMKDAKSISD---RKQYSKEYEQIYQKIAEDQPYTFLYYPNNHMAMPENLEGYKYHPKRDLYNIEKWWLAK
4QFO Chain:A ((31-523))----------------------------------------------LVYCAEANPVSFNPQVTTTGSTIDIIANQLYDRLISIDPVTAEFKSELATDWKISKDGKSVTFTLRKGVKFHTTAYFTPTREFNADDVIFTFSRLFDVYNPYHFVGDANYPYFQSVGIDQLIRKIVRVSDHQVRFELFNAESSFLANMATDFAVVLSKEYAMALK-ANNQENLFD-QYPVGTGPYIYKEYRRDHLVRFYKNADYWKHEVALEQLVYDITPNGTTRIAKILTKECDVTAHPSSAQLSILAQRDDINVERETNLNIGYWAFNTERPPFDNLKVRQALVHAIDIEKIMQAVYYGNGLRARSILPPTSWAFEPQKNMPIFD--PQLAKKLLTEAGYE------------KGFDMSIWAMPVSRIYNPNARKMAELMQSDLRKIGVNVNIVEYEWNTFIQRIG--EHRHDSVLLGWAADT-PDPDNFFSPLLSCTATFSGKNPANWCNPEFDLLLTKALDTTDLNLRKQY---YDAAQSMIIEQLPLYPIAHGMRFQASSADVEGITLGP--------------


General information:
TITO was launched using:
RESULT:

Template: 4QFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2533 -155107 -61.23 -336.46
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -61.23
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4QFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QFO-query.scw
PDB file : Tito_Scwrl_4QFO.pdb: