Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTYESKTGNVKRFVKALQQEFDVEAIEIT----DDTIINQEFIHITYTIG----FGEVPERTLSFINKNKNK--IRGVAVSGNKVWGDNYGLAGDKLSAKFHTPLLLKFELSGTKQDLQKIIQEVQLIDKHNTKLDQAQ
3N3B Chain:C ((27-145))--FSSSSENTQRFIERL----GLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGV--------------


General information:
TITO was launched using:
RESULT:

Template: 3N3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 465 7476 16.08 68.59
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : 16.08
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_3N3B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N3B-query.scw
PDB file : Tito_Scwrl_3N3B.pdb: