Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRQVKCPYCETKLDKDSA-IPYKKRYYHEKCFNTWKQESDHRKELIQYICNLYGLTSPTGMMLKQIKEFQEEYGYKLKGIELALRYFYETLDNQPREGDGIGIVPFVYDEAKRHYIRQKAIRKSAEDPKNHKREEITLVIKKGMRKKRGLVDISML
2CUP Chain:A ((8-38))------CVECRKPIGADSKEVHYKNRFWHDTCFRCAK------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2CUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 77 -8224 -106.81 -274.13
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -106.81
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.844

(partial model without unconserved sides chains):
PDB file : Tito_2CUP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CUP-query.scw
PDB file : Tito_Scwrl_2CUP.pdb: